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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP47_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAKTFFLFM LFIFSQSWLS TSKRILNNPS VFSSSLNFSS GNAERLIKSF NLMPKYDVNV  60
   61 IPKGSLDAPR LIERQIDFLA TAGSKNASVG PSVQEFGHYA GYYSLPHSKS AKMFYFFFES 120
  121 RNKTTDPVVI WLTGGPGCSS SVAMFYENGP FKISKDLSLY WNDFGWDKVS NIIYVDQPVG 180
  181 TGFSYTSDES DIRNDEDGVS NDLYDFLQAF FKEHPKFVKN DFFITGESYA GHYIPALASR 240
  241 VHSGNKKKEG IPINLKGFAI GNGLTNPEIQ YGAYGDYALQ MKLISESDHE SLKQDYVECQ 300
  301 NITKKCSLGG GLVCDSAVEV CTSIFNKIVA KKSGLNYYDI RKKCVGSLCY DFSRMEIFLN 360
  361 KENVRKALGV GDIKFVSCSS TVYDAMIEDW MQNLEVKIPS LVNDGINLLV YAGEYDLICN 420
  421 WLGNSRWVDQ MNWSGQKGFG SAKNVSFLVD GKEAGLLKNH GPLTFLKVYN AGHMVPMDQP 480
  481 KASLQMLQNW MQGKLRTTPV LGFSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle