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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7436526, gi|3...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLKQSSAA VLVVGNTTPV LHTSRSTYRV GPFPVTRTQS FQSLTMANLQ KLPTSSSGKL  60
   61 NTASAVPCSS HDASPISENR ENKHVHGVSE KIVGVLGGGQ LGRMLCQAAS QLAIKVMILD 120
  121 PSKNCSASAL SYGHMVDSFD DSATVEEFAK RCGVLTVEIE HVDVDTLEKL EKQGVDCQPK 180
  181 ASTIRIIQDK YMQKVHFSQH GIPLPEFMEI SDIEGARKAG ELFGYPLMIK SKRLAYDGRG 240
  241 NAVANNQDEL SSAVTALGGF SRGLYIEKWA PFVKELAVIV ARGRDGSMVC YPVVETIHRD 300
  301 NICHIVKAPA DVPWKINKLA TDVAQKAVGS LEGAGVFAVE LFLTEDSQIL LNEVAPRPHN 360
  361 SGHQTIECCY TSQFEQHLRA VVGLPLGDPS MRTPASIMYN ILGEDDVIDG EAGFKLAHRL 420
  421 IARALCIPGA SVHWYDKPEM RKQRKMGHIT LVGQSMGILE QRLQCILSEQ SHQVHETPRV 480
  481 AIIMGSDTDL PVMKDAAKIL DLFGVTHEVK IVSAHRTPEM MYTYATSAHS RGVQVIIAGA 540
  541 GGAAHLPGMV ASLTPLPVIG VPVRATRLDG VDSLLSIVQM PRGVPVATVA INNATNAALL 600
  601 AVRMLGISDT DLVSRMRQYQ EDMRDENLNK GEKLETEGWE SYLNQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle