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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC14_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFKLNIPNT IIKTLQTIVF FLFVLLAFQI AEAEIHHHTF KIKSKAYTRL CNTNKILTVN  60
   61 GEFPGPTLKA YRGDKLIVNV INNANYNITL HWHGARQIRN PWSDGPEYVT QCPIRPGESY 120
  121 VYRIDLKVEE GTIWWHAHSQ WARATVHGAF IVYPKRGSSY PFPKPHREIP LILGEWWKKE 180
  181 NIMHIPGKAN KTGGEPAISD SYTINGQPGY LYPCSKPETF KITVVRGRRY LLRIINAVMD 240
  241 EELFFAIANH TLTVVAKDGF YLKHFKSDYL MITPGQSMDV LLHANQRPNH YFVAARAYSS 300
  301 AFGAGFDKTT TTAILQYKGD TLNRIKPILP YLPPYNRTEA STRFTNQFRS QRPVNVPVKI 360
  361 NTRLLYAISV NLMNCSDDRP CTGPFGKRFS SSINNISFVN PSVDILRAYY RHIGGVFQED 420
  421 FPRNPPTKFN YTGENLPFPT RFGTKVVVLD YNSSVELILQ GTTVWASNIH PIHLHGYNFY 480
  481 VVGSGFGNFD RRKDPLRYNL VDPPEETTVG VPRNGWTAVR FVANNPGVWL LHCHIERHAT 540
  541 WGMNTVFIVK DGPTKSSRMV KPPPDLPSC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle