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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25404938, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLIVTGIA TSTAKGFRRV VNPNLLGGGA AARAFSDYRE KLRTGFLHSI RFEDAFALFF  60
   61 EMVHSQPLPS IVDFTRLLTA TANLRRYETV IYFSQKMELY GISHDLYSFT ILIHCFCRCS 120
  121 RLSFALSVLG KMMKLGYEPS IVTFGSLLHG FCLVNRIGDA FSLVILMVKS GYEPNVVVYN 180
  181 TLIDGLCKNG ELNIALELLN EMEKKGLGAD VVTYNTLLTG LCYSGRWSDA ARMLRDMMKR 240
  241 SINPDVVTFT ALIDVFVKQG NLDEAQELYK EMIQSSVDPN NVTYNSIING LCMHGRLYDA 300
  301 KKTFDLMASK GCFPNVVTYN TLISGFCKFR MVDEGMKLFQ RMSCEGFNAD IFTYNTLIHG 360
  361 YCQVGKLRVA LDIFCWMVSR RVTPDIITHC ILLHGLCVNG EIESALVKFD DMRESEKYIG 420
  421 IVAYNIMIHG LCKADKVEKA WELFCRLPVE GVKPDARTYT IMILGLCKNG PRREADELIR 480
  481 RMKEEGIICQ MNAEDDHLEE HSSSNKEISL SLREIWERSK SNPFWMQRLI PIAFSSSVKG 540
  541 FVRRHYLLLE RGNNPETSLS RSFSGASHHH HYRERLRNEL HCIKFDDAFS LFCEMLQSRP 600
  601 IPSIVDFTRV LTVIAKMNKF DIVIYLYHKM ENLGISHDLY SFTILIHCFC RCSRLSLALA 660
  661 LLGKMMKLGF RPSIVTLGSL LNGFCQGNRF QEAVSLVDSM DGFGFVPNVV IYNTVINGLC 720
  721 KNRDLNNALE VFYCMEKKGI RADAVTYNTL ISGLSNSGRW TDAARLLRDM VKRKIDPNVI 780
  781 FFTALIDTFV KEGNLLEARN LYKEMIRRSV VPNVFTYNSL INGFCIHGCL GDAKYMFDLM 840
  841 VSKGCFPDVV TYNTLITGFC KSKRVEDGMK LFCEMTYQGL VGDAFTYNTL IHGYCQAGKL 900
  901 NVAQKVFNRM VDCGVSPDIV TYNILLDCLC NNGKIEKALV MVEDLQKSEM DVDIITYNII 960
  961 IQGLCRTDKL KEAWCLFRSL TRKGVKPDAI AYITMISGLC RKGLQREADK LCRRMKEDGF1020
 1021 MPSERIYDET LRDHYTSLSA ELIKAAHE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle