YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4586250, gi|7...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACLLRVALN PTFERSTVAS QRQNPKTILS FHCKVSSFKT KTMSQSFAPR EKLMRKCREK  60
   61 KEAEREAERE AEREAEEEEK AEEAEAEADK EEAEEESEEE EEEEEEEAEA EEEALGGDIE 120
  121 DLFSENETQK IRMGLLDWYD VNKRDLPWRN RRSESEKERR AYEVWVSEIM LQQTRVQTVM 180
  181 KYYKRWMQKW PTIYDLGQAS LENLIVSRSR ELSFLRGNEK KEVNEMWAGL GYYRRARFLL 240
  241 EGAKMVVAGT EGFPNQASSL MKVKGIGQYT AGAIASIAFN EVSQFHFFQS SMKLAAQLVD 300
  301 PSRPGDFNQS LMELGATLCT VSKPSCSSCP VSSQCRAFSL SEENRTISVT DYPTKVIKAK 360
  361 PRHDFCCVCV LEIHNLERNQ SGGRFVLVKR PEQGLLAGLW EFPSVILNEE ADSATRRNAI 420
  421 NVYLKEAFRF HVELKKACTI VSREELGEFV HIFTHIRRKV YVELLVVQLT GGTEDLFKGQ 480
  481 AKDTLTWKCV SSDVLSTLGL TSAVRKVPPF RLQHIKRLSL DVMVEKEQIL ECRCIQWLKH 540
  541 TSKAYLFLMS HQIEQPYRGN ENSHDLLLTL FFMLLSFYSS CLALGIKFGD LGLKLNSLVS 600
  601 TEKSDGDV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle