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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK38_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSAAIFLT SSLILLLQTL HGVKAGFICV GSSFPTNSSY QKNRDSLFST LSDKVTTNGG  60
   61 FYNASLDGVH VVGLCRRDYD RQGCINCVEE SIRQIKTSCS NRVQSFHCNS DDRERVSCLV 120
  121 RTTDQSTYRI LELGPATNDP SPVAIDTFAK NMTLFRQEWE AMVDRTLEAV TIDNSTTVLK 180
  181 YYGALKSEFS EFPNVYMMMQ CTPDINSGAC KRCLQASVTY FRDQNWGRQG GGICRPSCVF 240
  241 RWEFYPFYGA FANVTRVPAP PRALIPRTEA ISITRLKGGI IAIFVVPIVI NLLVFIGLIR 300
  301 AYTRIRKSYN GINEAQYDYG GQSKLRFDFR MILTATDDFS FENKIGQGGF GSVYKGKLPG 360
  361 GEEIAVKRLT RGSGQGEIEF RNEVLLLTRL QHRNLVKLLG FCNEGDEEIL VYEFVPNSSL 420
  421 DHFIFDEEKR LLLTWDMRAR IIEGVARGLV YLHEDSQLRI IHRDLKASNI LLDAYMNPKV 480
  481 ADFGMARLFN MDQTRAVTRK VVGTFGYMAP EYVRNRTFSV KTDVYSFGVV LLEMITGRSN 540
  541 KNYFEALGLP AYAWKCWVAG EAASIIDHVL SRSRSNEIMR FIHIGLLCVQ ENVSKRPTMS 600
  601 LVIQWLGSET IAIPLPTVAG FTNASYQAEH EAGTLSLNEL SITELSPR

YRC Informatics Platform - Version 3.0
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