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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25287706, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKRIMFFA SLLLITIFLS FSYAGITRES PLSIGKTLSS SNGVYELGFF SFNNSQNQYV  60
   61 GIWFKGIIPR VVVWVANREK PVTDSAANLT ISSNGSLLLF NENHSVVWSI GETFASNGSR 120
  121 AELTDNGNLV VIDNNSGRTL WESFEHFGDT MLPFSNLMYN LATGEKRVLT SWKSHTDPSP 180
  181 GDFTVQITPQ VPSQACTMRG SKTYWRSGPW AKTRFTGIPV MDDTYTSPFS LQQDTNGSGS 240
  241 FTYFERNFKL SYIMITSEGS LKIFQHNGMD WELNFEAPEN SCDIYGFCGP FGICVMSVPP 300
  301 KCKCFKGFVP KSIEEWKRGN WTDGCVRHTE LHCQGNTNGK TVNGFYHVAN IKPPDFYEFA 360
  361 SFVDAEGCYQ ICLHNCSCLA FAYINGIGCL MWNQDLMDAV QFSAGGEILS IRLASSELGG 420
  421 NKRNKIIVAS ILMHGNTLTI IESLVSAKIS KIASKEAWNN DLEPQDVSGL KFFEMNTIQT 480
  481 ATDNFSLSNK LGQGGFGSVY KGKLQDGKEI AVKRLSSSSG QGKEEFMNEI VLISKLQHKN 540
  541 LVRILGCCIE GEERLLVYEF LLNKSLDTFL FVLIVSIRYY CLDSRKRLEI DWPKRFNIIE 600
  601 GIARGLHYLH RDSCLRVIHR DLKVSNILLD EKMNPKISDF GLARMYQGTE YQDNTRRVAG 660
  661 TLGYMAPEYA WTGMFSEKSD IYSFGVILLE IITGEKISRF SYGRQGKTLL AYVNLKPKQQ 720
  721 AWESWCESGG IDLLDKDVAD SCHPLEVERC VQIGLLCVQH QPADRPNTME LLSMLTTTSD 780
  781 LTSPKQPTFV VHTRDEESLS QGLITVNEMT QSVILGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle