YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT3H_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSFLIADT SSLVIGLLLI LNGVFISAAK HYGLNKIHIV HLGAKQHDTP ELVTKSHYQI  60
   61 LEPLLGSKEA AKNSLVYNYK HGFSGFAAKL TASQAKNLSA HPEVLRVVPS RVMRLKTTRT 120
  121 FDYLGLLPTS PKSLLHKTKM GSEAIIGVID SGIWPESQSF NDTGLGPIPK RWKGKCLSGN 180
  181 GFDAKKHCNK KLIGAEYLTV GLMEMTDGIY DYPSLGESMS PRDHVGHGTH VAAIAAGSFV 240
  241 ANANYKGLAG GTARGAAPHA RIAMYKVCWR EVGCITADLL KAIDHSIRDG VDVISISIGT 300
  301 DAPASFDIDQ SDIGFGSFHA VMKGIPVVAS AGNEGPNAQT VDNVAPWIIT VAATSLDRSF 360
  361 PIPITLGNNL TILGEGLNTF PEVGFTNLIL SDEMLSRSIE QGKTQGTIVL AFTANDEMIR 420
  421 KANSITNAGC AGIIYAQSVI DPTVCSSVDV PCAVVDYEYG TDILYYMQTT VVPKAKLSPS 480
  481 KTLIGRPIAS RVPRFSCRGP NSVSPAILKP DIAAPGVNVL SAVSGVYKFM SGTSMATPAV 540
  541 SGIVGLLRQT HPHWSPAAIR SALVTTAWKT DPSGEPIFSE GSTRKLADPF DYGGGLINPE 600
  601 KVTHPGLIYD MGIDDYLHYL CSAEYDDDSI SKLLGKTYNC TSPKPSMLDF NLPSITIPSL 660
  661 TGEVTVTRTV RNVGPARSVY RPVIESPLGI ELDVKPKTLV FGSNITKITF SVRVKSSHRV 720
  721 NTDFYFGSLC WTDGVHNVTI PVSVRTKFMR NYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle