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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPA11_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSHLALVC AAIAFSSIFV VSQAGITSTH ARVSEPSEEM SLETFPPPAG YNAPEQVHIT  60
   61 QGDNAGRAMI ISWVMPLNED GSNVVTYWIA SSDGSDNKNA IATTSSYRYF NYTSGYLHHA 120
  121 TIKKLEYDPS KSRSRCSLHI RYYSDLGQTY ASNQTLYNYM SNPKGQAVLF VGDLSYADDH 180
  181 PNHDQRKWDS YGRFVEPSAA YQPWSWAAGN YEIDYAQSIS ETQPFKPYKN RYHVPYKASQ 240
  241 STSPLWYSIK RASTYIIVLS SYSAYDKYTP QNSWLQDELK KVNRSETSWL IVLVHAPWYN 300
  301 SNNYHYMEGE SMRVTFEPWF VENKVDIVFA GHVHAYERSK RISNIHYNIT DGMSTPVKDQ 360
  361 NAPIYITIGD GGNIEGIANS FTDPQPSYSA FREASFGHAL LEIKNRTHAH YTWHRNKEDE 420
  421 AVIADSIWLK KRYYLPEEET A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle