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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BXL1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCYNKALLI GNKVVVILVF LLCLVHSSES LRPLFACDPA NGLTRTLRFC RANVPIHVRV  60
   61 QDLLGRLTLQ EKIRNLVNNA AAVPRLGIGG YEWWSEALHG ISDVGPGAKF GGAFPGATSF 120
  121 PQVITTAASF NQSLWEEIGR VVSDEARAMY NGGVAGLTYW SPNVNILRDP RWGRGQETPG 180
  181 EDPIVAAKYA ASYVRGLQGT AAGNRLKVAA CCKHYTAYDL DNWNGVDRFH FNAKVTQQDL 240
  241 EDTYNVPFKS CVYEGKVASV MCSYNQVNGK PTCADENLLK NTIRGQWRLN GYIVSDCDSV 300
  301 DVFFNQQHYT STPEEAAARS IKAGLDLDCG PFLAIFTEGA VKKGLLTEND INLALANTLT 360
  361 VQMRLGMFDG NLGPYANLGP RDVCTPAHKH LALEAAHQGI VLLKNSARSL PLSPRRHRTV 420
  421 AVIGPNSDVT ETMIGNYAGK ACAYTSPLQG ISRYARTLHQ AGCAGVACKG NQGFGAAEAA 480
  481 AREADATVLV MGLDQSIEAE TRDRTGLLLP GYQQDLVTRV AQASRGPVIL VLMSGGPIDV 540
  541 TFAKNDPRVA AIIWAGYPGQ AGGAAIANII FGAANPGGKL PMTWYPQDYV AKVPMTVMAM 600
  601 RASGNYPGRT YRFYKGPVVF PFGFGLSYTT FTHSLAKSPL AQLSVSLSNL NSANTILNSS 660
  661 SHSIKVSHTN CNSFPKMPLH VEVSNTGEFD GTHTVFVFAE PPINGIKGLG VNKQLIAFEK 720
  721 VHVMAGAKQT VQVDVDACKH LGVVDEYGKR RIPMGEHKLH IGDLKHTILV QPQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle