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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CPNB2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTFTATSS LGSLLAPNAI KLSSATSISS SSFGRRHNVC VRRSRPAIVC AAKELHFNKD  60
   61 GTTIRKLQTG VNKLADLVGV TLGPKGRNVV LESKYGSPRI VNDGVTVARE VELEDPVENI 120
  121 GAKLVRQAAA KTNDLAGDGT TTSVVLAQGF IAEGVKVVAA GANPVLITRG IEKTAKALVN 180
  181 ELKLMSKEVE DSELADVAAV SAGNNHEVGS MIAEAMSKVG RKGVVTLEEG KSAENNLYVV 240
  241 EGMQFDRGYI SPYFVTDSEK MSVEYDNCKL LLVDKKVTNA RDLVGVLEDA IRGGYPILII 300
  301 AEDIEQEALA TLVVNKLRGT LKIAALKAPG FGERKSQYLD DIAILTGATV IREEVGLSLD 360
  361 KAGKEVLGNA SKVVLTKEMT TIVGDGTTQE AVNKRVVQIR NLIEQAEQDY EKEKLNERIA 420
  421 KLSGGVAVIQ VGAQTETELK EKKLRVEDAL NATKAAVEEG IVVGGGCTLL RLASKVDAIK 480
  481 DTLENDEEKV GAEIVKRALS YPLKLIAKNA GVNGSVVSEK VLANDNVKFG YNAATGKYED 540
  541 LMAAGIIDPT KVVRCCLEHA ASVAKTFLMS DCVVVEIPEP EPVPAGNPMD NSGYGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle