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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y1155_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.77
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRFACFLFS TLLLSFSYAA ITPTSPLSIG QTLSSPNGIF ELGFFSPNNS RNLYVGIWFK  60
   61 GIIPRTVVWV ANRENSVTDA TADLAISSNG SLLLFDGKHS TVWSTGETFA SNGSSAELSD 120
  121 SGNLLVIDKV SGITLWQSFE HLGDTMLPYS SLMYNPGTGE KRVLSSWKSY TDPLPGEFVG 180
  181 YITTQVPPQG FIMRGSKPYW RSGPWAKTRF TGVPLTDESY THPFSVQQDA NGSVYFSHLQ 240
  241 RNFKRSLLVL TSEGSLKVTH HNGTDWVLNI DVPANTCDFY GVCGPFGLCV MSIPPKCKCF 300
  301 KGFVPQFSEE WKRGNWTGGC VRRTELLCQG NSTGRHVNVF HPVANIKPPD FYEFVSSGSA 360
  361 EECYQSCLHN CSCLAFAYIN GIGCLIWNQE LMDVMQFSVG GELLSIRLAS SEMGGNQRKK 420
  421 TIIASIVSIS LFVTLASAAF GFWRYRLKHN AIVSKVSLQG AWRNDLKSED VSGLYFFEMK 480
  481 TIEIATNNFS LVNKLGQGGF GPVYKGKLQD GKEIAVKRLS SSSGQGKEEF MNEILLISKL 540
  541 QHINLVRILG CCIEGEERLL VYEFMVNKSL DTFIFDSRKR VEIDWPKRFS IIQGIARGLL 600
  601 YLHRDSRLRI IHRDVKVSNI LLDDKMNPKI SDFGLARMYE GTKYQDNTRR IVGTLGYMSP 660
  661 EYAWTGVFSE KSDTYSFGVL LLEVISGEKI SRFSYDKERK NLLAYAWESW CENGGVGFLD 720
  721 KDATDSCHPS EVGRCVQIGL LCVQHQPADR PNTLELLSML TTTSDLPLPK EPTFAVHTSD 780
  781 DGSRTSDLIT VNEVTQSVVL GR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle