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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15222414, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNRDNSIVA LSFFMLFLLV LHLHFETTTA ARKPVRVFGP PSSIEWSPPS PPKDDFEWFE  60
   61 INIYKNIEQT AFRPTGQGPS QGIGHKDPPV FSSVFVIGSL SFIPPPHPFD PLTEIELNLV 120
  121 RNIINERYPI GLEHRFTFQY VGLNEPDKSL VLSWVSSQYH NVKSPPRQAF VIARDHGKTR 180
  181 EIVVDFASQA IVSEKIHVGN GYPMLTIDEQ QATSELVLKF KPFRDSIRRR GLNVSEVVVT 240
  241 TSTMGWFGEA KPERLIKKRP FYLNGSVNTY LRPIEGMTII VNLDQMKVTK FRDRFTSPLP 300
  301 NAKGTEFRIS KLKPPFGPSL QNAVLFQSEG PGFKIDGHTN RWANWEFHMS FDVRAGLVIS 360
  361 LASIFDMDVN KYRQVLYKGH LSEIFVPYMD PSEDWYFRTF FDCGEFGCGQ YAVSLEPYTD 420
  421 CPGNAAFMDG VFASQDGTPI KITNVMCIFE KYAGDIMWRH TEIEIPGLKV RPDVSLVVRM 480
  481 VTTVGNYDYI VDYEFKPSGS IKIGVGLTGV LEVKPVKYVN TSEIKEDDIH GTIVADNTIG 540
  541 VNHDHFVTYR LDLDIDGTDN SFVRSELVTK RTPKSVNTPR KSYWTTKRLK AEELLVVNPS 600
  601 RKTKHGNEVG YRLLHGPASE GPLLAQDDYP QIRAAFTNYN VWITPYNNTE VWASGLYADR 660
  661 SQGDDTLAVW SQRNRKIEKT DIVMWYTVGF HHVPCQEDFP TMPTLFGGFE LRPTNFFEQN 720
  721 PDLKTKPIKL NTTPTCTARN D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle