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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PEX14_ARATH
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATHQQTQPP SDFPALADEN SQIPEATKPA NEVQQATIAQ DPPTSVFKNS EPIREDQIQN  60
   61 AIKFLSHPRV RGSPVIHRRS FLERKGLTKE EIDEAFRRVP DPPPSSQTTV TTSQDGQQAV 120
  121 STVQPQAMQP VVAAPAPLIV TPQAAFLSRF RWYHAILAVG VLAASGAGTA VFIKRSLIPR 180
  181 FKSWVQRIML EEETDPLKKA DAKPSLAEEA VAAAKAASAA ASDVARVSQE MMITKNEERK 240
  241 YFEDLTHLLG VQVQEMKSLS NNIRKLEGQS NNIPKIYSAD QEVYNGSVTT ARKPYTNGSN 300
  301 VDYDTRSARS ASPPAAPADS SAPPHPKSYM DIMSMIQRGE KPSNIREIND MPPNPNQPLS 360
  361 DPRIAPKSKP WDYGQAPQDE SSNGQWWQQK NPRSTDFGYE TTTAARFTAN QNETSTMEPA 420
  421 AFQRQRSWVP PQPPPVAMAE AVEAIRRPKP QAKIDQEAAA SDGQSGVSDE LQKITKFSES 480
  481 GGDGSGGIKI AEIQEETEQQ HISQEGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle