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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8778246
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSTTQTLI FTVFLLLIPT SFAAPPKLKD SFTQCVTVFK PSVPIQNFTY TQQNPNFLTI  60
   61 LNNYVRNLRY FNGTTRKPVA IVAAAHFTHI QATINCAKKL GLQLRIRSGG HDYDGMSYLS 120
  121 TVDFVVLDMF NLRAIEIDPK LDTAWVQSGA TLGEIYYNVA NKSNNLRGFP AGICPGLGAG 180
  181 GHFSGGGYGN MMRKYGLSID NIIDAKIVDA NARVLDRSSM GEDLFWALRG GGAASFCVVL 240
  241 AWKIKLVPVP EKVTVFNVET IGNRGVIPTD LAAKWQEIAD KIDNDLFIRL TLSSSNKTVK 300
  301 ASFMGMYLGN SEKLLEIMNA KFPELGLNKT ECIEMKWIES VLFWLSIPPG TAPTSVMLNR 360
  361 IPQKQIYLKR KSDYVQKPIS KPGLESIFKI LSENENVSMA WNPYGGRMSE IPATETAFPH 420
  421 RAGNMFKIQY SSNWFVPGEE AASDCLSQTE RVFEAMSPYV SKNPREAFLN YRDIDIGKNL 480
  481 NSTYEEGKVY GVKYFKNNFE RLVQVKTRVD PDNIFRYEQS IPVHVSHGKV NFAKELYGES 540
  541 LQISKLSNKD HGLENLDDPF YGSSDEDYSE ARVLDNENEQ RRVKFHSAGY RDGIVVGKEA 600
  601 IAQEGYNFGY KESVLAGYKF GIVREKLIDE QETREKFQKL HSSVHALSTE VAMKQFYETL 660
  661 TTKQGEEKSG EEGPDSCSVS GSCSGVNVTA DLGSYVTELS SLLDKSPTIE VKFDT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle