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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT15_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFFFYFFFL LTLSSPSSSA SSSNSLTYIV HVDHEAKPSI FPTHFHWYTS SLASLTSSPP  60
   61 SIIHTYDTVF HGFSARLTSQ DASQLLDHPH VISVIPEQVR HLHTTRSPEF LGLRSTDKAG 120
  121 LLEESDFGSD LVIGVIDTGV WPERPSFDDR GLGPVPIKWK GQCIASQDFP ESACNRKLVG 180
  181 ARFFCGGYEA TNGKMNETTE FRSPRDSDGH GTHTASISAG RYVFPASTLG YAHGVAAGMA 240
  241 PKARLAAYKV CWNSGCYDSD ILAAFDTAVA DGVDVISLSV GGVVVPYYLD AIAIGAFGAI 300
  301 DRGIFVSASA GNGGPGALTV TNVAPWMTTV GAGTIDRDFP ANVKLGNGKM ISGVSVYGGP 360
  361 GLDPGRMYPL VYGGSLLGGD GYSSSLCLEG SLDPNLVKGK IVLCDRGINS RATKGEIVRK 420
  421 NGGLGMIIAN GVFDGEGLVA DCHVLPATSV GASGGDEIRR YISESSKSRS SKHPTATIVF 480
  481 KGTRLGIRPA PVVASFSARG PNPETPEILK PDVIAPGLNI LAAWPDRIGP SGVTSDNRRT 540
  541 EFNILSGTSM ACPHVSGLAA LLKAAHPDWS PAAIRSALIT TAYTVDNSGE PMMDESTGNT 600
  601 SSVMDYGSGH VHPTKAMDPG LVYDITSYDY INFLCNSNYT RTNIVTITRR QADCDGARRA 660
  661 GHVGNLNYPS FSVVFQQYGE SKMSTHFIRT VTNVGDSDSV YEIKIRPPRG TTVTVEPEKL 720
  721 SFRRVGQKLS FVVRVKTTEV KLSPGATNVE TGHIVWSDGK RNVTSPLVVT LQQPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle