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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPA25_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMNKILLVF VFLSIATVIN SGTTSNFVRT AQPSTEMSLE TFPSPAGHNA PEQVHIVQGD  60
   61 YNGRGIIISW VTPLNLAGSN VVTYWKAVDG DVKPKKKRGH ASTSSYRFYD YTSGFLHHAT 120
  121 IKGLEYDTKY IYEVGTDGSV RQFSFTSPPK VGPDVPYTFG IIGDLGQTLA SNETLYHYMS 180
  181 NPKGQAVLFP GDLSYADDHP NHDQRKWDSW GRFVEPCAAY QTFIYAAGNH EIDFVPNIGE 240
  241 PHAFKPYIHR YHNAYKASKS ISPLWYSIRR ASAHIIVLSS YSAYGKYTPQ YVWLEQELKK 300
  301 VNREETPWLI VMVHSPWYNS NNYHYMEGES MRAMFESWFV NSKVDLVLSG HVHSYERSER 360
  361 VSNIKYNITN GLSYPVKDPS APIYITIGDG GNIEGIANSF TDPQPSYSAY REASFGHAVL 420
  421 EIYNRTHAYY TWHRNQDNEP VAADSIMLHN RYFFPVEELE SGNTRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle