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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP39_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGELQDWSVT TCLLLLLFQA SQIHCTSQTH VLNRLLYRSK RGFGSSVDTN HLNAIRHLSV  60
   61 SSPQNTSGVN QQEQKERDLI ENLPGQPSVS FRQYGGYVTV NESAGRSLYY YFVEATKTKK 120
  121 SLPLVLWLNG GPGCSSLYGA FQELGPFRIY GDGKTLYTNP YSWNNVANIL FLESPVGTGF 180
  181 SYTNTESDLE NPGDMKAAAD KYIFLVKWLE RFPEYKGREF YIAGESYAGH YVPQLAQTIL 240
  241 VHNKNQNFIN LRGILIGNPT LNDIVETTGS FDYLVSHALL SQDSLLSYKE NCATDTPKME 300
  301 VDCIALSMKI DDDIKKMNLY NILTPTCINA TLTPLTNQSK ECTTVLQYEP CGMQYIAAYL 360
  361 NREDVQRSMH VTKLPHTWML CNEATGFNWN QTDYSASMLP ILKELMKHDQ LRVWVYTGDT 420
  421 DTVIPLTVTM HALKMMNLTA VTDWLPWFSE GQVGGFTEEY KGNFRYATVI GAGHEVPLYK 480
  481 PKAALTLFKH FIRNSPLPLT P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle