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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3056588
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKWIVFFA YLLLSSFFIS SSSAGITKES PLPIGQTLSS SNGFYELGFF NFNNSQNQYV  60
   61 GIWFKGIIPR VVVWVANREK PVTDSTANLA ISNNGSLLLF NGKHGVAWSS GEALVSNGSR 120
  121 AELSDTGNLI VIDNFSGRTL WQSFDHLGDT MLPSSTLKYN LATGEKQVLS SWKSYTDPSV 180
  181 GDFVLQITPQ VPTQVLVTKG STPYYRSGPW AKTRFTGIPL MDDTFTGPVS VQQDTNGSGS 240
  241 LTYLNRNDRL QRTMLTSKGT QELSWHNGTD WVLNFVAPEH SCDYYGVCGP FGLCVKSVPP 300
  301 KCTCFKGFVP KLIEEWKRGN WTGGCVRRTE LYCQGNSTGK YANVFHPVAR IKPPDFYEFA 360
  361 SFVNVEECQK SCLHNCSCLA FAYIDGIGCL MWNQDLMDAV QFSEGGELLS IRLARSELGG 420
  421 NKRKKAITAS IVSLSLVVII AFVAFCFWRY RVKHNADITT DASQVSWRND LKPQDVPGLD 480
  481 FFDMHTIQTA TNNFSISNKL GQGGFGPVYK GKLQDGKEIA VKRLSSSSGQ GKEEFMNEIV 540
  541 LISKLQHKNL VRILGCCIEG EEKLLIYEFM LNNSLDTFLF GGFLLASFLY YQQLFLYMEL 600
  601 SYLIVHTLYC RLDSRKRLEI DWPKRLDIIQ GIARGIHYLH RDSHLKVIHR DLKVSNILLD 660
  661 EKMNPKISDF GLARMYQGTE YQDNTRRVVG TLGYMAPEYA WTGMFSEKSD IYSFGVLMLE 720
  721 IISGEKISRF SYGKEEKTLI AYAWESWCDT GGIDLLDKDV ADSCRPLEVE RCVQIGLLCV 780
  781 QHQPADRPNT LELLSMLTTT SDLPPPEQPT FVVHRRDDKS SSEDLITVNE MTKSVILGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle