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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y4119_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.75
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQICKKNVFL LYYGVLVFLS FQVSSSTDTI STNQPLSGFE TIVSSGDIFE LGLFTPTPDT  60
   61 YDHRNYYIGM WYRHVSPQTI VWVANRESPL GGDASTYLLK ILDGNLILHD NISATRKSHT 120
  121 EGTSRRSPQK ISEGNLLFHE TVWSTGVNSS MSKDVQAVLF DSGNLVLRDG PNSSAAVLWQ 180
  181 SFDHPSDTWL PGGKIRLGSQ LFTSWESLID PSPGRYSLEF DPKLHSLVTV WNRSKSYWSS 240
  241 GPLYDWLQSF KGFPELQGTK LSFTLNMDES YITFSVDPQS RYRLVMGVSG QFMLQVWHVD 300
  301 LQSWRVILSQ PDNRCDVYNS CGSFGICNEN REPPPCRCVP GFKREFSQGS DDSNDYSGGC 360
  361 KRETYLHCYK RNDEFLPIEN MKLATDPTTA SVLTSGTFRT CASRCVADCS CQAYANDGNK 420
  421 CLVWTKDAFN LQQLDANKGH TFFLRLASSN ISTANNRKTE HSKGKSIVLP LVLASLVATA 480
  481 ACFVGLYCCI SSRIRRKKKQ RDEKHSRELL EGGLIDDAGE NMCYLNLHDI MVATNSFSRK 540
  541 KKLGEGGFGP VYKGKLPNGM EVAIKRLSKK SSQGLTEFKN EVVLIIKLQH KNLVRLLGYC 600
  601 VEGDEKLLIY EYMSNKSLDG LLFDSLKSRE LDWETRMKIV NGTTRGLQYL HEYSRLRIIH 660
  661 RDLKASNILL DDEMNPKISD FGTARIFGCK QIDDSTQRIV GTFGYMSPEY ALGGVISEKS 720
  721 DIYSFGVLLL EIISGKKATR FVHNDQKHSL IAYEWESWCE TKGVSIIDEP MCCSYSLEEA 780
  781 MRCIHIALLC VQDHPKDRPM ISQIVYMLSN DNTLPIPKQP TFSNVLNGDQ QLDYVFSINE 840
  841 ATQTELEAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle