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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT19_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMTVVIILV FSFFVAIVTA ETSPYIIHMD LSAKPLPFSD HRSWFSTTLT SVITNRKPKI  60
   61 IYAYTDSVHG FSAVLTNSEL QRLKHKPGYV SFTKDLPVKL HTTFSPKFIG LNSTSGTWPV 120
  121 SNYGAGIVIG IIDTGIWPDS PSFHDDGVGS VPSKWKGACE FNSSSLCNKK LIGAKVFNKG 180
  181 LFANNPDLRE TKIGQYSSPY DTIGHGTHVA AIAAGNHVKN ASYFSYAQGT ASGIAPHAHL 240
  241 AIYKAAWEEG IYSSDVIAAI DQAIRDGVHV ISLSLGLSFE DDDDNDGFGL ENDPIAVASF 300
  301 AAIQKGVFVV TSGGNDGPYY WSLINGAPWI MTVGAGTIGR QFQGTLTFGN RVSFSFPSLF 360
  361 PGEFPSVQFP VTYIESGSVE NKTLANRIVV CNENINIGSK LHQIRSTGAA AVVLITDKLL 420
  421 EEQDTIKFQF PVAFIGSKHR ETIESYASSN KNNATAKLEF RKTVIGTKPA PEVGTYSSRG 480
  481 PFTSFPQILK PDILAPGTLI LSAWPSVEQI TGTRALPLFS GFNLLTGTSM AAPHVAGVAA 540
  541 LIKQVHPNWS PSAIKSAIMT TALTLDNPLA VGAGHVSTNK VLNPGLIYDT TPQDFINFLC 600
  601 HEAKQSRKLI NIITRSNISD ACKKPSPYLN YPSIIAYFTS DQSSPKIFKR TLTNVGEAKR 660
  661 SYIVRVRGLK GLNVVVEPKK LMFSEKNEKL SYTVRLESPR GLQENVVYGL VSWVDEDEAE 720
  721 FEVSCSVVAT SLVQES

YRC Informatics Platform - Version 3.0
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