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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3056586
Protein type: Globular with Signal Peptide
Type Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKRIVLLL FISFSYAEIT KESPLSIGQT LSSSNGVYEL GFFSFNNSQN QYVGIWFKGI  60
   61 IPRVVVWVAN REKPVTDSAA NLVISSSGSL LLINGKHDVV WSTGEISASK GSHAELSDYG 120
  121 NLMVKDNVTG RTLWESFEHL GNTLLPLSTM MYNLVTGEKR GLSSWKSYTD PSPGDFWVQI 180
  181 TPQVPSQGFV MRGSTPYYRT GPWAKTRYTG IPQMDESYTS PFSLHQDVNG SGYFSYFERD 240
  241 YKLSRIMLTS EGSMKVLRYN GLDWKSSYEG PANSCDIYGV CGPFGFCVIS DPPKCKCFKG 300
  301 FVPKSIEEWK RGNWTSGCAR RTELHCQGNS TGKDANVFHT VPNIKPPDFY EYANSVDAEG 360
  361 CYQSCLHNCS CLAFAYIPGI GCLMWSKDLM DTMQFSAGGE ILSIRLAHSE LDVHKRKMTI 420
  421 VASTVSLTLF VILGFATFGF WRNRVKHHED AWRNDLQSQD VPGLEFFEMN TIQTATSNFS 480
  481 LSNKLGHGGF GSVYKARNVL SYSLFFFSVF SEDDICNFFQ GKLQDGREIA VKRLSSSSEQ 540
  541 GKQEFMNEIV LISKLQHRNL VRVLGCCVEG KEKLLIYEFM KNKSLDTFVF GGLHLASFLK 600
  601 RLELDWPKRF DIIQGIVRGL LYLHRDSRLR VIHRDLKVSN ILLDEKMNPK ISDFGLARLF 660
  661 QGSQYQDKTR RVVGTLGYMS PEYAWTGVFS EKSDIYSFGV LLLEIISGEK ISRFSYGEEG 720
  721 KALLAYVWEC WCETRGVNLL DQALDDSSHP AEVGRCVQIG LLCVQHQPAD RPNTLELLSM 780
  781 LTTTSDLPLP KQPTFAVHTR NDEPPSNDLM ITVNEMTESV ILGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle