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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9759164, gi|2...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.58
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLYLSSTMQ LSLMSLVLGF LFVSCDAFAS KEVEAVRRFK EAIYKDPLLV MSNWNVPNLS  60
   61 PCDWNGIKCS PSKDHIIKIN ISGTSMRGFL VPELGQITYL QELILRGNIL MGTIPKEIGK 120
  121 LKKLKILDLG NNHLTGPIPA EIGKLSRIKT INLQSNGLIG KLPPEIGNLK HLKELLIGRN 180
  181 RLRGSIPIAA KTSKKYASNP SANISGLCKS SLFKVADFSY NFFEGRVPSC LDYLPITSFQ 240
  241 GNCMKTMDVK QRPLSECARL AVTVAKKKHR ASRQTWLRNF EIVTGSSVGL LFLVVMFSAC 300
  301 SLCKIKRSLI VPWKKSASEK EKFTVYVDSE MLKDVSRYTR QELEVACEDF SNIIDSSAES 360
  361 QIYKGTIKGG TEIAVISLCV KEENWTGYLE LNFQREVAAL ARLNHENAGK LLGYCKESTP 420
  421 FTRMLVFEYA SNGTLYDHLH YADGSLVSWA KRMKIVIGIA RGLKYLHTEL HPPFTVSELS 480
  481 STAVYLTEDF TPKLVDFECW KIIQVRSEKN LKNICNEGAI CVLPNAMEHR DMDLQGNIYS 540
  541 FGILLLEIVS GRPSYCQDRG CLVEWVREKN LGAPDVMASL VDPELKHFKQ KELEAVCEVA 600
  601 SQCLNLDQNE KDKDKLSCSI QALCETLESR ITVSISAEFK SSSLAWAELA LASPSNEDDD 660
  661 DRSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle