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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C8D11_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTKTIMET IYLILSLFFF FIFLSLKLLF GPRPRKLNLP PSPSRPFPII GHLHLLKLPL  60
   61 HRRFLSLSES LNNAKIFSLS LGSRLVFVVS SHAVAEECFT KNDVVLANRP EFLVGKHIGY 120
  121 NSTTMVGAAY GDSWRNLRRI GTIEIFSSLR LNSFVSIRQD EIRRLIICLA KNSQHGFVKV 180
  181 EMKPLFMCLT INNIIRMVAG KRFYGDGTEN DNEAKHVRQL IAEVVVSGGA GNAADYFPIL 240
  241 RYVTNYEKHV KKLAGRVDEF LQSLVNEKRV EKVKGNTMID HLLSLQETQP DYYTDVIIKG 300
  301 IILVMILAGT DTSAGTLEWA MSNLLNHPEV LRKAKTEIDD QIGVDRLVEE QDIVKLPYLQ 360
  361 HIVSETLRLY PVAPMLLPHL ASEDCIVDGY DVPRGTIILV NAWAIHRDPK LWEEPEKFKP 420
  421 ERFEKKGEDK KLMPFGIGRR SCPGSGLAQR LVTLALGSLV QCFEWERVEE KYLDMRESEK 480
  481 GTTMRKATSL QAMCKARPIV HKVLDASCP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle