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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYPM_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSSSLRLPS LTSLLFPATT RYPATLRRTV CLRNRPLSGF ATAPSGTASP ETKSSEVDRL  60
   61 RSDRAVTPRS QDFNAWYLDV IASAELADYG PVRGTMVIRP YGYAIWEAIQ DYLNVKFKET 120
  121 GHSNMYFPQF IPYSFIEKEA SHVEGFSPEL ALVTVGGGKE LEEKLVVRPT SETIVNHMFT 180
  181 QWIHSYRDLP LMINQWANVT RWEMRTKPFI RTLEFLWQEG HTAHATPEEA EKEAKQMIEI 240
  241 YTRFAFEQTA IPVIPGRKSK LETFAGADIT YTIEAMMGDR KALQAGTSHN LGQNFSRAFG 300
  301 TQFADENGER QHVWQTSWAV STRFVGGIIM THGDDTGLML PPKIAPIQVV IVPIWKKDTE 360
  361 KTGVLSAASS VKEALQTAGV RVKLDDTDQR TPGWKFNFWE MKGIPLRIEI GPRDVSSNSV 420
  421 VVSRRDVPGK AGKVFGISME PSTLVAYVKE KLDEIQTSLL EKALSFRDSN IVDVNSYAEL 480
  481 KDAISSGKWA RGPWSASDAD EQRVKEETGA TIRCFPFEQT QGTKTCLMTG NPAEEVAIFA 540
  541 KSY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle