YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PEX5_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMRDLVNGG AACAVPGSSS SSNPLGALTN ALLGSSSKTQ ERLKEIPNAN RSGPRPQFYS  60
   61 EDQQIRSLPG SELDQPLLQP GAQGSEFFRG FRSVDQNGLG AAWDEVQQGG PMPPMGPMFE 120
  121 PVQPTFEGPP QRVLSNFLHS FVESSRGGIP FRPAPVPVLG LSQSDKQCIR DRSSIMARHF 180
  181 FADRGEEFIN SQVNALLSSL DIDDGIQARG HVPGRFRELD DYWNESQAVV KPNLHPADNW 240
  241 AAEFNQHGMD HGGPDSWVQS FEQQHGVNGW ATEFEQGQSQ LMSSQMRSMD MQNIAAMEQT 300
  301 RKLAHTLSQD GNPKFQNSRF LQFVSKMSRG ELIIDENQVK QASAPGEWAT EYEQQYLGPP 360
  361 SWADQFANEK LSHGPEQWAD EFASGRGQQE TAEDQWVNEF SKLNVDDWID EFAEGPVGDS 420
  421 SADAWANAYD EFLNEKNAGK QTSGVYVFSD MNPYVGHPEP MKEGQELFRK GLLSEAALAL 480
  481 EAEVMKNPEN AEGWRLLGVT HAENDDDQQA IAAMMRAQEA DPTNLEVLLA LGVSHTNELE 540
  541 QATALKYLYG WLRNHPKYGA IAPPELADSL YHADIARLFN EASQLNPEDA DVHIVLGVLY 600
  601 NLSREFDRAI TSFQTALQLK PNDYSLWNKL GATQANSVQS ADAISAYQQA LDLKPNYVRA 660
  661 WANMGISYAN QGMYKESIPY YVRALAMNPK ADNAWQYLRL SLSCASRQDM IEACESRNLD 720
  721 LLQKEFPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle