YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7267928, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPKLSSRLF LLITTACFIL LFTSTNFSQA PSSTAKLFDC TKSSSSPFCA SRNFLFNKNT  60
   61 RPISKNIPKT KPKNHDHVSD TPNHPLDPLT VMEINKVRSI LSSHALFASR VPHLLNSVVL 120
  121 EEPDKNLVRQ WEKGDQLPPR KASVIARVGG NSHLLIVDLS TSRVDQADSP VPESGYPIVT 180
  181 SEEMDSAASA PFSNADFNRT INSRGVNLTD VICIPISSGW FGNKDDNTKR VTKIQCFSTQ 240
  241 DTPNFYMRPI EGLTLLFDLD TKRILEITDT GQSIPIPGST NTDYRYSTLP NHDKTRPLNT 300
  301 ISLEQPRGPS FVIEDNHLVK WANWEFHLKP DPRAGLIMSQ VKIHDPDTQE TREVMYKGFV 360
  361 SELFVPYMDP SEAWYFKTYM DAGEYGFGLQ AMPLEPVAEP KNLFIGPLND CPRNAVYMDG 420
  421 TFAAADGTPY VRENMICVFE SYAGDIAWRH TEYPVNGMPN

Type	Start	End	Confidence
Signal Peptide	1	30	0.95
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	460	0.99