YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB7G_ARATH
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPFGGKSLA DVVSGIGGNG VGGALAAVAA ALLVRLFAGP GIALLPEDEA EDDYAETEDG  60
   61 GGDSIRPVTI RWRNITCSLS DKSSKSVRFL LKNVSGEAKP GRLLAIMGPS GSGKTTLLNV 120
  121 LAGQLSLSPR LHLSGLLEVN GKPSSSKAYK LAFVRQEDLF FSQLTVRETL SFAAELQLPE 180
  181 ISSAEERDEY VNNLLLKLGL VSCADSCVGD AKVRGISGGE KKRLSLACEL IASPSVIFAD 240
  241 EPTTGLDAFQ AEKVMETLQK LAQDGHTVIC SIHQPRGSVY AKFDDIVLLT EGTLVYAGPA 300
  301 GKEPLTYFGN FGFLCPEHVN PAEFLADLIS VDYSSSETVY SSQKRVHALV DAFSQRSSSV 360
  361 LYATPLSMKE ETKNGMRPRR KAIVERTDGW WRQFFLLLKR AWMQASRDGP TNKVRARMSV 420
  421 ASAVIFGSVF WRMGKSQTSI QDRMGLLQVA AINTAMAALT KTVGVFPKER AIVDRERSKG 480
  481 SYSLGPYLLS KTIAEIPIGA AFPLMFGAVL YPMARLNPTL SRFGKFCGIV TVESFAASAM 540
  541 GLTVGAMVPS TEAAMAVGPS LMTVFIVFGG YYVNADNTPI IFRWIPRASL IRWAFQGLCI 600
  601 NEFSGLKFDH QNTFDVQTGE QALERLSFGG RRIRETIAAQ SRILMFWYSA TYLLLEKNKP 660
  661 KYQKLELLVD NGETGNSGVQ LDKAEVDQTE KPEDDDINQP LDDQNQTSDS DDELDEIRPF 720
  721 VLEGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle