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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51971929, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTLCATLLI LLSIFLATPS NVRGNAELKA LMELKSSLDP ENKLLRSWTF NGDPCDGSFE  60
   61 GIACNQHLKV ANISLQGKRL VGKLSPAVAE LKCLSGLYLH YNSLSGEIPQ EITNLTELSD 120
  121 LYLNVNNFSG EIPADIGSMA GLQVMDLCCN SLTGKIPKNI GSLKKLNVLS LQHNKLTGEV 180
  181 PWTLGNLSML SRLDLSFNNL LGLIPKTLAN IPQLDTLDLR NNTLSGFVPP GLKKLNGSFQ 240
  241 FENNTGLCGI DFPSLRACSA FDNANNIEQF KQPPGEIDTD KSALHNIPES VYLQKHCNQT 300
  301 HCKKSSSKLP QVALISSVIT VTITLIGAGI LTFFRYRRRK QKISNTPEFS EGRLSTDQQK 360
  361 EFRASPLVSL AYTKEWDPLG DSRNGAEFSQ EPHLFVVNSS FRFNLEDIES ATQCFSEANL 420
  421 LSRNSFTSVF KGVLRDGSPV AIRSINISSC KNEEVEFMNG LKLLSSLSHE NLVKLRGFCC 480
  481 SRGRGECFLI YDFASKGKLS NFLDLQERET NLVLAWSARI SIIKGIAKGI AYLHGSDQQK 540
  541 KPTIVHRNIS VEKILLDEQF NPLIADSGLH NLLADDMVFS ALKTSAAMGY LAPEYVTTGK 600
  601 FTEKTDIFAF GVIILQILSG KLMLTSSLRN AAENGEHNGF IDEDLREEFD KPEATAMARI 660
  661 GISCTQEIPN NRPNIETLLE NINCMKSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle