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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7268960, gi|4...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENCLSTLVF LLSIALVLFP KTGVSFLAAE GASDSDSKVY IVYLGEREHD DPELFTASHH  60
   61 QMLESLLQRS TSLTCVSNDI YSKDDAHNSL IYSYQYGFSG FAALLTSSQA KKISEHPEVI 120
  121 HVIPNRILKL KTTRTWDHLG LSPNPTSFSS SSSAKGLLHE TNMGSEAIIG VVDTGIWPES 180
  181 KVFNDHGLGP IPQRWRGKCE SGEQFNAKIH CNNKLIGAKY YLSGLLAETG GKFNRTIIQD 240
  241 FKSNRDAIGH GTHTATIAGG SFVPNVSFYG LARGTVRGGA PRARIASYKV CWNVVGYDGI 300
  301 CTVADMWKAF DDAIHDQVDV LSVSIGAGIP ENSEVDSVDF IAAFHAVAKG ITVVAAGGND 360
  361 GPGAQNITNA APWLLTVAAT TLDRSFPTKI TLGNNQTLFA ESLFTGPEIS TSLAFLDSDH 420
  421 NVDVKGKTIL EFDSTHPSSI AGRGVVAVIL AKKPDDLLAR YNSIPYIFTD YEIGTHILQY 480
  481 IRTTRSPTVR ISAATTLNGQ PAMTKVAEFS SRGPNSVSPA ILKPDIAAPG VSILAAVSPL 540
  541 DPDAFNGFGL YSGTSMSTPV VSGIIALLKS LHPNWSPAAM RSALVTTAWR TSPSGEPIFA 600
  601 QGSNKKLADP FDYGGGLVNP DKAAQPGLVY DMGIKDYINY MCSAGYIDSS ISRVLGKKTK 660
  661 CTIPKPSILD INLPSITIPN LEKEVTLTRT VTNVGPIKSV YKAVIESPLG ITLTVNPTTL 720
  721 VFNSAAKRVL TFSVKAKTSH KVNSGYFFGS LTWTDGVHDV IIPVSVKTTI SM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle