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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: 1MMP_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.56
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRNLIYRRN RALCFVLILF CFPYRFGARN TPEAEQSTAK ATQIIHVSNS TWHDFSRLVD  60
   61 VQIGSHVSGV SELKRYLHRF GYVNDGSEIF SDVFDGPLES AISLYQENLG LPITGRLDTS 120
  121 TVTLMSLPRC GVSDTHMTIN NDFLHTTAHY TYFNGKPKWN RDTLTYAISK THKLDYLTSE 180
  181 DVKTVFRRAF SQWSSVIPVS FEEVDDFTTA DLKIGFYAGD HGDGLPFDGV LGTLAHAFAP 240
  241 ENGRLHLDAA ETWIVDDDLK GSSEVAVDLE SVATHEIGHL LGLGHSSQES AVMYPSLRPR 300
  301 TKKVDLTVDD VAGVLKLYGP NPKLRLDSLT QSEDSIKNGT VSHRFLSGNF IGYVLLVVGL 360
  361 ILFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle