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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: XPF_ARATH
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKYHQQII SDLLEDSNGG LLILSSGLSL AKLIASLLIL HSPSQGTLLL LLSPAAQSLK  60
   61 SRIIHYISSL DSPTPTEITA DLPANQRYSL YTSGSPFFIT PRILIVDLLT QRIPVSSLAG 120
  121 IFILNAHSIS ETSTEAFIIR IVKSLNSSAY IRAFSDRPQA MVSGFAKTER TMRALFLRKI 180
  181 HLWPRFQLDV SQELEREPPE VVDIRVSMSN YMVGIQKAII EVMDACLKEM KKTNKVDVDD 240
  241 LTVESGLFKS FDEIVRRQLD PIWHTLGKRT KQLVSDLKTL RKLLDYLVRY DAVSFLKFLD 300
  301 TLRVSESYRS VWLFAESSYK IFDFAKKRVY RLVKASDVKS KEHVKNKSGK KRNSKGETDS 360
  361 VEAVGGETAT NVATGVVVEE VLEEAPKWKV LREILEETQE ERLKQAFSEE DNSDNNGIVL 420
  421 VACKDERSCM QLEDCITNNP QKVMREEWEM YLLSKIELRS MQTPQKKKQK TPKGFGILDG 480
  481 VVPVTTIQNS EGSSVGRQEH EALMAAASSI RKLGKTTDMA SGNNNPEPHV DKASCTKGKA 540
  541 KKDPTSLRRS LRSCNKKTTN SKPEILPGPE NEEKANEAST SAPQEANAVR PSGAKKLPPV 600
  601 HFYALESDQP ILDILKPSVI IVYHPDMGFV RELEVYKAEN PLRKLKVYFI FYDESTEVQK 660
  661 FEASIRRENE AFESLIRQKS SMIIPVDQDG LCMGSNSSTE FPASSTQNSL TRKAGGRKEL 720
  721 EKETQVIVDM REFMSSLPNV LHQKGMKIIP VTLEVGDYIL SPSICVERKS IQDLFQSFTS 780
  781 GRLFHQVEMM SRYYRIPVLL IEFSQDKSFS FQSSSDISDD VTPYNIISKL SLLVLHFPRL 840
  841 RLLWSRSLHA TAEIFTTLKS NQDEPDETRA IRVGVPSEEG IIENDIRAEN YNTSAVEFLR 900
  901 RLPGVSDANY RSIMEKCKSL AELASLPVET LAELMGGHKV AKSLREFLDA KYPTLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle