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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK4_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFWLFPFL LHLSFADSLS PLSAPVQNFI HLNHSCPSSI LTYSRNSTYF TNLKTLLSSL  60
   61 SSRNASYSTG FQTATAGQAP DRVTGLFLCR GDVSQEVCRN CVAFSVKETL YWCPYNKEVV 120
  121 LYYDECMLRY SHRNILSTVT YDGSAILLNG ANISSSNQNQ VDEFRDLVSS TLNLAAVEAA 180
  181 NSSKKFYTRK VITPQPLYLL VQCTPDLTRQ DCLRCLQKSI KGMSLYRIGG RFFYPSCNSR 240
  241 YENYSFYNET ATRSSSPPSL PPRSTPQQQL KLAPPPLISE RGKGRNSSVI IVVVVPIIAL 300
  301 LLLFVAFFSL RAKKTRTNYE REPLTEESDD ITTAGSLQFD FKAIEAATNK FCETNKLGQG 360
  361 GFGEVYKGIF PSGVQVAVKR LSKTSGQGER EFANEVIVVA KLQHRNLVRL LGFCLERDER 420
  421 ILVYEFVPNK SLDYFIFDST MQSLLDWTRR YKIIGGIARG ILYLHQDSRL TIIHRDLKAG 480
  481 NILLGDDMNA KIADFGMARI FGMDQTEANT RRIVGTYGYM SPEYAMYGQF SMKSDVYSFG 540
  541 VLVLEIISGK KNSNVYQMDG TSAGNLVTYT WRLWSNGSPL ELVDPSFRDN YRINEVSRCI 600
  601 HIALLCVQEE AEDRPTMSAI VQMLTTSSIA LAVPQRPGFF FRSSKHEQVG LVDRLSINTS 660
  661 ALCSVDDASI TNVTPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle