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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25295729, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFKVFSFVA FMACSTVKVG SIVWVQDPEE AWIDGEVVEV NGEDIKVQCT SGKTVVAKGS  60
   61 NTYPKDMEVP PSGVDDMTTL AYLHEPGVLQ NLKSRYYIDE IYTYTGNILI AVNPFKQLPN 120
  121 LYNDHMMAQY KGAALGELSP HPFAVADAAY RQMINEGISQ SILVSGESGA GKTETAKMLM 180
  181 KYLAKMGGRA VSDRRTVEDQ VLESNPVLEA FGNAKTVKNN NSSRFGKFVE IQFDQRGRIS 240
  241 GAAIRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEDKRK LKLNDPTEFR YLNQSHCIKL 300
  301 DGVDDSKEYT KTREAMGIVG INLEEQEAIF RVVAAILHLG NIEFAIGEEP DSSVPTDESK 360
  361 KYLKIAAELF MCDEQALEDS LCKRIMVTPE ETISRCLDPN SAALSRDALA KFVYSRLFDW 420
  421 IVNKINNSIG QDPDSKDMIG VLDIYGFESF KTNSFEQFCI NLTNEKLQQH FTQHVLKMEQ 480
  481 EEYTKEEIEW SQITFPDNRY VLELIEKKRG GIIALLDEAC MFPRSTHKTF SQKLYETLKD 540
  541 NKYFSKPKLS RTDFTICHYA GDVTYQTEQF LEKNKDYVVA EHQALLGASR CTFIAGLFPP 600
  601 LVEDANKQSK FSSIASQFKQ QLASLIEGLN TTEPHYIRCV KPNNLLKPSI FENQNSLQQL 660
  661 RCGGVMETIR VCRAGYPTRK HFDEFLDRFG ILDSATLDKS SDEKAACKKL LETVGLNGFQ 720
  721 IGKTKVFLKA GQMAELDDRR TEVLGRAACI IQWKFRSYLT RQSFIMLRNA AINIQAVYRG 780
  781 QVARYRFENL RREAAALKIQ RALRIHLDRK RSYIEAVVTV QSGLRGMAAR VVLRRKTKAT 840
  841 TVIQSHCRRL RAELHYKKLK KAAITTQSAW RARLARKELR KLKTDARDTV VLQAAKSMLA 900
  901 EKVEELTWRL DLEKRMRVDM EVSKAQENAK LQLALEEIQL QFEETKVSLL KEVEAAKKTA 960
  961 AIVPVVKEVP VVDTVLMEKL TSENEKLKSL VTSLELKIDE TEKKFEETKK ISEERLKKAL1020
 1021 DAENKIDNLK TAMHNLEEKL KEVKLENNFL KESVLTTPVK TASGRFLSTP LKNLQNGLFT1080
 1081 SEESQLSGAE FTTPPRIQES GSDTKSRGSH IDPQHRDLLG FLEKEDVDAL INSVTKNVGF1140
 1141 SQGKPVAAFT IYKCLLHWKS FEAERTNVFD RLVQMIGSAI KDEDNDANLA YWLSNTSTLL1200
 1201 FMLQQSLKSG GTGATPLRQS PSLVRWMTKG FRSPAAEAIR PVDAKDPALH FKQQLEAYVE1260
 1261 KILGIIWDNL KKELNTVLAL CIQAPKTFKG NALISITTAN YWQDIIEGLD ALLSTLKESF1320
 1321 VPPVLIQKIF SQAFSLINVQ VCNSLVTRPD NCSFINGEYL KSGLEKLEKW CCETKEEYAG1380
 1381 SSWDELKHTR QAVGFLLIHK KYNISYDEIA NDLCPNLQIQ QHFKLCTLYK DEIYNTKSVS1440
 1441 QDVIASMTGV MTDSSDFLLK EDSSNIISLS IDDLCSSMQD KDFAQVKPAE ELLENPSFIF1500
 1501 LH

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