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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25287700, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTRFACLHL FTMFLFTLLS GSSSAVITTE SPLSMGQTLS SANEVYELGF FSPNNTQDQY  60
   61 VGIWFKDTIP RVVVWVANRE KPVTDSTAYL AISSSGSLLL LNGKHGTVWS SGVTFSSSGC 120
  121 RAELSDSGNL KVIDNVSERA LWQSFDHLGD TLLHTSSLTY NLATAEKRVL TSWKSYTDPS 180
  181 PGDFLGQITP QVPSQGFVMR GSTPYWRSGP WAKTRFTGIP FMDESYTGPF TLHQDVNGSG 240
  241 YLTYFQRDYK LSRITLTSEG SIKMFRDNGM GWELYYEAPK KLCDFYGACG PFGLCVMSPS 300
  301 PMCKCFRGFV PKSVEEWKRG NWTGGCVRHT ELDCLGNSTG EDADDFHQIA NIKPPDFYEF 360
  361 ASSVNAEECH QRCVHNCSCL AFAYIKGIGC LVWNQDLMDA VQFSATGELL SIRLARSELD 420
  421 GNKRKKTIVA SIVSLTLFMI LGFTAFGVWR CRVEHIGNIL MTLLSNDLLL LFNSFACKRK 480
  481 KAHISKDAWK NDLKPQDVPG LDFFDMHTIQ NATNNFSLSN KLGQGGFGSV YKGKLQDGKE 540
  541 IAVKRLSSSS GQGKEEFMNE IVLISKLQHR NLVRVLGCCI EEEEKLLIYE FMVNKSLDTF 600
  601 LFDSRKRLEI DWPKRFDIIQ GIARGLLYLH HDSRLRVIHR DLKVSNILLD EKMNPKISDF 660
  661 GLARMYQGTE YQDNTRRVVG TLGYMSPEYA WTGMFSEKSD IYSFGVLMLE IISGEKISRF 720
  721 SYGVEGKTLI AYAWESWSEY RGIDLLDQDL ADSCHPLEVG RCIQIGLLCV QHQPADRPNT 780
  781 LELLAMLTTT SDLPSPKQPT FAFHTRDDES LSNDLITVNG MTQSVILGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle