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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBIR1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.20
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPTGSANL FLRPLILAVL SFLLLSSFVS SVEWLDIDSS DLKALQVIET ELGVNSQRSS  60
   61 ASDVNPCGRR GVFCERRHSA TTGEYVLRVT RLVYRSRSLT GTISPVIGML SELKELTLSN 120
  121 NQLVNAVPVD ILSCKQLEVL DLRKNRFSGQ IPGNFSSLSR LRILDLSSNK LSGNLNFLKN 180
  181 LRNLENLSVA NNLFSGKIPE QIVSFHNLRF FDFSGNRYLE GPAPVMSSIK LQTSPHQTRH 240
  241 ILAETPTSSP TNKPNNSTTS KAPKGAPKPG KLKKKKKKSK KKKVAAWILG FVVGAIGGTI 300
  301 SGFVFSVLFK LIIQAIRGSE KPPGPSIFSP LIKKAEDLAF LENEEALASL EIIGRGGCGE 360
  361 VFKAELPGSN GKIIAVKKVI QPPKDADELT DEDSKFLNKK MRQIRSEINT VGHIRHRNLL 420
  421 PLLAHVSRPE CHYLVYEYME KGSLQDILTD VQAGNQELMW PARHKIALGI AAGLEYLHMD 480
  481 HNPRIIHRDL KPANVLLDDD MEARISDFGL AKAMPDAVTH ITTSHVAGTV GYIAPEFYQT 540
  541 HKFTDKCDIY SFGVILGILV IGKLPSDEFF QHTDEMSLIK WMRNIITSEN PSLAIDPKLM 600
  601 DQGFDEQMLL VLKIACYCTL DDPKQRPNSK DVRTMLSQIK H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle