YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CISY2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEISQRVKAR LAVLTAHLAV SDTVGLEQVL PAIAPWCTSA HITAAPHGSL KGNLTIVDER  60
   61 TGKKYQVPVS EHGTVKAVDL KKITTGKDDK GLKLYDPGYL NTAPVRSSIC YIDGDEGILR 120
  121 YRGYPIEELA ESSTFIEVAY LLMYGNLPSQ SQLADWEFTV SQHSAVPQGV LDIIQSMPHD 180
  181 AHPMGVLVSA MSALSIFHPD ANPALSGQDI YKSKQVRDKQ IVRILGKAPT IAAAAYLRTA 240
  241 GRPPVLPSAN LSYSENFLYM LDSMGNRSYK PNPRLARVLD ILFILHAEHE MNCSTAAARH 300
  301 LASSGVDVYT ACAGAVGALY GPLHGGANEA VLKMLAEIGT AENIPDFIEG VKNRKRKMSG 360
  361 FGHRVYKNYD PRAKVIKKLA DEVFSIVGRD PLIEVAVALE KAALSDEYFV KRKLYPNVDF 420
  421 YSGLIYRAMG FPPEFFTVLF AVPRMAGYLS HWRESLDDPD TRIMRPQQAY TGVWMRHYEP 480
  481 VRERTLSSDS DKDKFGQVSI SNASRRRLAG SSAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle