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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RHM3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATYKPKNIL ITGAAGFIAS HVANRLVRSY PDYKIVVLDK LDYCSNLKNL NPSKSSPNFK  60
   61 FVKGDIASAD LVNYLLITEE IDTIMHFAAQ THVDNSFGNS FEFTKNNIYG THVLLEACKV 120
  121 TGQIRRFIHV STDEVYGETD EDASVGNHEA SQLLPTNPYS ATKAGAEMLV MAYGRSYGLP 180
  181 VITTRGNNVY GPNQFPEKLI PKFILLAMNG KPLPIHGDGS NVRSYLYCED VAEAFEVVLH 240
  241 KGEVNHVYNI GTTRERRVID VANDISKLFG IDPDSTIQYV ENRPFNDQRY FLDDQKLKKL 300
  301 GWCERTNWEE GLRKTMEWYT ENPEWWGDVS GALLPHPRML MMPGDRHSDG SDEHKNADGN 360
  361 QTFTVVTPTK AGCSGDKRSL KFLIYGKTGW LGGLLGKLCE KQGIPYEYGK GRLEDRASLI 420
  421 ADIRSIKPSH VFNAAGLTGR PNVDWCESHK TETIRVNVAG TLTLADVCRE NDLLMMNFAT 480
  481 GCIFEYDAAH PEGSGIGFKE EDKPNFTGSF YSKTKAMVEE LLREFDNVCT LRVRMPISSD 540
  541 LNNPRNFITK ISRYNKVVNI PNSMTILDEL LPISIEMAKR NLRGIWNFTN PGVVSHNEIL 600
  601 EMYKSYIEPD FKWSNFNLEE QAKVIVAPRS NNEMDGAKLS KEFPEMLSIK DSLIKYVFEP 660
  661 NKRT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle