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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149065911
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRSQRLTR YSQDDNDGSS SSGASSVAGG QSTVFKDSPL RTLKRKSSNM KRLSPAPQLP  60
   61 PPSDSHTSYY SESVVRESYI GSPRAVSLAR SALLDDHLHS EPYWSGDLRG RRRRGTGGSE 120
  121 SSKANGLTME NKASEDFFGS SSGYSSEDDL AGYTDSDQHS SGSGLRSAAS RAGSFVWTLV 180
  181 TLPGRLFGLL YWWVGTTWYR LTTAASLLDV FVLTRSRHFS PNLKSFLWFL LLLLLLTGLT 240
  241 YGAWHFYPLG LQTLQPAVAS WWAAKESRRQ PEVWDTRDAS SHLQAEQRIL SRVHSLERRL 300
  301 EALAAEFSSN WQKEAIRLER LELRQGAAGH GGGSSLSHED ALSLLEGLVS RREAALKEDL 360
  361 RRDTVARIQE ELATLRAEHH QDSEDLFKKI VQASQESEAR VQQLKTEWRS MTQEAFQESS 420
  421 VKELERLEAQ LAGLRQELAA LTLKQNSVAD EVGLLPQKIQ AARADVESQF PDWISQFLLR 480
  481 DRGARSGLLQ RDEMHAQLQE LENKILANMA EMQGKSAREA AASLGQTLQK EGIVGVTEEQ 540
  541 VHRIVKQALQ RYSEDRIGMV DYALESGGAS VISTRCSETY ETKTALLSLF GIPLWYHSQS 600
  601 PRVILQPDVH PGNCWAFQGP QGFAVVRLSA RIRPTAVTLE HVPKALSPNS TISSAPKDFA 660
  661 IFGFDEDLQQ EGTLLGTFAY DQDGEPIQTF YFQASKMATY QVVELRILTN WGHPEYTCIY 720
  721 RFRVHGEPAH 

YRC Informatics Platform - Version 3.0
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