YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157820883, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPVTAGIFK ALLFIFSSLC AWYSGYLLAE LIPDVPLSNT LYNIRSIGER PVLKAPVPKR  60
   61 QKCDHWSPCP PDTYAYRLLS GGGLDKYAKI CFEDEMLLGE KTGNVARGIN IAVVDYETGK 120
  121 VISTKYFDMY EGDNSEPMTK FIQSIPSKSL LFMVTHDDGS HKLQAQAKDA IEALGSKEIK 180
  181 NIKFRSSWVF VAAKGFVLPS ERREKKSTTQ INPGTDTPAG QQRSRSKDAY PKG

Type	Start	End	Confidence
Signal Peptide	1	29	0.81
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	233	0.99