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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149058286, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLWGMLAFP LGFLLASALL VASAPANPET PGCSHKDQQV TVSHTYKIDV PKSALVQVET  60
   61 DPQSLSDDGT SLLVPGEDGE EQNIIFRHNI RLQTPQKNCE LADSVQDLLA RVKKLEEEMA 120
  121 ELKEQCSTSR CCQGAADLSR HCSGHGTFFA ETCSCHCDQG WEGADCEQPT CPGACSGHGR 180
  181 CVDGQCVCDQ PYVGVDCAYA ACPQDCSGHG VCVRGVCQCH KDFTAEDCSE QRCPGDCSGN 240
  241 GFCDTGECYC EMGFTGPDCS QVVAPQGLQL LKSTENSLLV SWEPSSEVDH YLLSYYPLGK 300
  301 EQATKQVRVP KEQHTYDITG LLPGTKYIVT LRNVKKDISS SPQHLLATTD LAVVGTAWVN 360
  361 EETETSLDVE WENPLTEVDY YKLRYGPLTG QEVTEVTVPK SRDPKSRYDI TGLQPGTEYK 420
  421 ITVVPIRGDL EGKPILLNGR TEIDGPTNVV TNQVTEDTAS VSWDPVRADI DKYVVRYISP 480
  481 DGETKEKAVP KDQSSTVLTG LKPGEAYKVF VWAERGNQGS KKADTKALTE IDSPENLVTD 540
  541 RVTENSLSVS WDPVEAEIDR YVVSYTSVDG ETKQVPVRKD QSSTVLTGLS PGVEYKVYVW 600
  601 AEKGDRESKK ANTKAPTDID SPKNLVTDQV TENTLSVSWD PVQANIDRYM VSYTSADGET 660
  661 REVPVPKEKS STVLTGLRPG MEYKVHVWAQ KGTQESRKAN TKAPTDIDGP KNLVTDQVTE 720
  721 TTLSVSWDPV EADIDRYMVR YTSPDGETKE VPVSKDKSST VLRGLRPGVE YKVDVWAQKG 780
  781 AQDSRKANTK APTGIVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle