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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149050659
Protein type: Globular with Signal Peptide
Type Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRPLGSCPS FGAALFPLPR QPRSSLGLAG PAGDVPCACR RLTSLPANAL RFAPWPRMVT  60
   61 GCGAAPPGTV TEPLPSVIVL SAGRKMAAAA AEASGPSCSS AAAAAGAGAA GVSEWLVLRD 120
  121 GCMRCDADGL HSLSYHPALN AILAVTSRGT IKVIDGTSGA TLQASALSAK PGGQVKCQYI 180
  181 SAVDKVIFVD DYAVGCRKDL NGILLLDTAL QTPVSKQDDV VQLELPVTEA QQLLSACVEK 240
  241 IDVSSTEGYD LFITQLKDGL KNTSHETAAN HKVAKWATVT FHLPHHVLKS IASAIVNELK 300
  301 KINQNVAALP VASSVMDRLS YLLPSARPEL GVGPGRSVDR ALMYSEANRR ETFTSWPHVG 360
  361 YRWAQPDPMA QAGFYHQPAS SGDDRAMCFT CSVCLVCWEP TDEPWSEHER HSPNCPFVKG 420
  421 EHTQNVPLSV TLATSPAQLP SADGADRISC FGSGSCPQFL AAATKRGKIC IWDVSKLMKV 480
  481 HLKFEINAYD PVIVQQLILS GDPSSGVDSR RPTLAWLEDS SSCSDIPKLE GDSDDLLEDS 540
  541 DSEEHSRSDS VTGHTSQKEA MEVSLDITAL SILQQPEKLQ WEIVANVLED TVKDLEELGA 600
  601 NPCLTNSKSE KTKEKHQEQH NIPFPCLLAG GLLTYKSPAT SPISSNSHRS LDGLSRTQGE 660
  661 SISEQGSTDN ESCTNSELNS PLVRRTLPVL LLYSIKESDE KAGKIFSQMN NIMSKSLHDD 720
  721 GFTVPQIIEM ELDNQEQLLL QDPPVTYIQQ FADAAASLTS PDSEKWNSVF PKPGTLVQCL 780
  781 RLPKFAEEET LCIDSITPCA DGVHLLVGLR TCSVESLSAI NQVEALNNLN KLNSALCNRR 840
  841 KGDLESNLAV VNGANISVIQ HESPADVPAP LIIQPEQRNL SGGYLVLYKM NYTTRIVTLE 900
  901 EEPVKIQHIK DPQDTITSLI LLPPDILDNR EDDCEEPAEE MQLTSKNGIE REKKSDVSTL 960
  961 GHLVVTTQGG YVKVLDLSNF EILAKVEPPK KEGTEDQDTF VSVIYCSGTD RLCACTKGGE1020
 1021 LHFLQIGGTC DDIDEADILV DGSLSKGIEP SLEGSRPLSN PSSPGISGVD LLVDQPFTLE1080
 1081 ILTSLVELTR FETLTPRFSA TVPPCWVEVQ QEQQQRRHPQ HLHQQHHGDA AQHTRTWKLQ1140
 1141 TDSNSWDEHV FELVLPKACM VGHVDFKFVL NSTITSVPQI QVSLLRNRAP GLGKANALNI1200
 1201 EVEQNGNPSL VDLNEEMHPM DVEESQCLRL CPFLEDHKED ILCGPVWLAS GLDLSGHAGM1260
 1261 LTLTSPKLVK GMAGGKYRSF LIHIKAVSDR GADEVCSSGL RPVVRLPSLK QQGHKGYSLA1320
 1321 SLLAKVAAGK EKSSNVKNES AGGTRKSENL RGCDLLQEVS VTIRRFKKTS ICKERVQRCA1380
 1381 MLQFSEFHEK LLNTLCRRSD DGLVTEHAQS LVLDTLCWLA GVHSNGPGSS KEGNECLLSK1440
 1441 TRTCLSDIVR VCFFEAGRSI AHKCARFLAL CISNGKCDPY QPGFGSVLLK ALLDNMCFLP1500
 1501 AAATGGSVYW YFVLLNYVKD EDLAACSTAC AALLTAVSRQ LQDRLTPLEA LLQTRYGLYS1560
 1561 SPFDPVLFDL EMSGSSCKNV YNSSIGVQSD EIDLSDVLSG NGKVSSCTAA EGSFTSLTGL1620
 1621 LEVEPLHFTC VSTSDGTRIE RDDASTFTVS SFGVTPAVGG LSSGTVGEAS TALSSAAQVA1680
 1681 LQSLSHAMAS AEQQLQVLQE KQQQLLKLQQ QKAKLEAKLH QTTAAAAAAA SAAAAAGPVH1740
 1741 NAVPSNPVAA PGFFIHPSDV IPPTPKTTPL FMTPPLTPPN EAVSVVINAE LAQLFPGSVI1800
 1801 DPPAVNLAAH NKNANKSRMN PLGSGLALAI SHASHFLQPP PHQSIIIERM HSGARRFVTL1860
 1861 DFGRPILLTD VLIPTCGDLA SLSIDIWTLG EEVDGRRLVV ATDISTHSLI LHDLIPPPVC1920
 1921 RFMKITVIGR YGSTNARAKI PLGFYYGHTY ILPWESELKL MHDPLRGEGE SANQPEIDQH1980
 1981 LAMMVALQED IQCRYNLACH RLEALLQSID LPPLNSANNA QYFLRKPDKA VEEDSRVFSA2040
 2041 YQDCIQLQLQ LNLAHNAVQR LKVAIGASRK TLSETSGPED LIPTSSTEQL RTIVRYLLDT2100
 2101 LLSLLHSSNG HSVPAVLQST FHAQACEELF KHLCISGTPK IRLHTGLLLV QLCGGERWWG2160
 2161 QFLSNVLQEL YNSEQLLIFP QDRVFMLLSC IGQRSLSNSG VLESLLNLLD NLLSPLQPEL2220
 2221 TMHRRTEGVL DIPMISWVVM LVSRLLDYVA TVEDEAAAAK KPLNGNQWSF INNNLHTQSL2280
 2281 NRSSKGGSSL DRLYSRKIRK QLVHHKQQLN LLKAKQKALV EQMEKEKIQS NKGSSYKLLV2340
 2341 EQAKLKQATS KHFKDLIRLR RTAEWSRSNL DTEVTTTKES PEIEPLPFTL AHDRCISVVQ2400
 2401 KLVLFLLSMD FTCHADLLLF VCKVLARIAN ATRPTIHLCE IVNEPQLERL LLLLVGTDFN2460
 2461 RGDISWGGAW AQYSLTCMLQ DILAGELLAP VAAEAMEEGT VSDDVGATAG DSDDSLQQSS2520
 2521 VQLLETIDEP LTHEIAGTPP LSSLEKDKEI DLELLQDLME ADIDPLDIDL EKDPLAAKVF2580
 2581 KPISSTWYDY WGADYGTYNY NPYIGGLGMP VAKPPSNTEK NGSQTVSVSV SQALDARLEV2640
 2641 GLEQQAELML KMMSTLEADS ILQALTSTPP TFSQSPSGTD DSLLGSLQPA NQNSQLIIQL2700
 2701 SSVPMLNVCF NKLFSMLQVH HVQLESLLQL WLTLSLNSSS SGNKENGADI FLYNANRIPV2760
 2761 ISLNQASITS FLTVLAWYPN TLLRTWCLVL HSLTLMTNMQ LNSGSSSSIG AQETTAHLLV2820
 2821 SDPNLIHVLV KFLSGTSPHG TNQHSPQVGP TATQAMQEFL TRLQVHLSST CPQIFSELLL2880
 2881 KLIHILSTER GAFQTGQGPL DAQVKLLEFT LEQNFEVVSV STISAVIESV TFLVHHYITC2940
 2941 SDKVMSRSGS DSSVGARACF GGLFANLIRP GDAKAVCGEM TRDQLMFDLL KLVNILVQLP3000
 3001 LSSNREYSAR VSMTTNTTDS VSDEEKVSGG KDVNGSNTSI PGSPAYVADL VLANQQIMSQ3060
 3061 ILSALGLCNS SAMAMIIGAS GLHLTKHENF HGGLDAISVG DGLFTILTTL SKKASTVHMM3120
 3121 LQPILTYMAC GYMGRQGSLA TCQLSEPLLW FILRVLDTSD ALKAFHDMGG VQLICNNMVT3180
 3181 STRAIVNTAR SMVSTIMKFL DSGPNKAVDS TLKTRILASE PDNAEGIHNF APLGTITSSS3240
 3241 PTAQPAEVLL QATPPHRRAR SAAWSYIFLP EEAWCDLTIH LPSAVLLKEI HIQPHLASLA3300
 3301 TCPSSVSVEV SADGVNMLPL STPVVTSGLT YIKIQLVKAE VASAVCLRLH RPRDASTLGL3360
 3361 SQIKLLGLTA FGTTSSATVN NPFLPSEDQV SKTSIGWLRL LHHCLTHISD LEGMMASAAA3420
 3421 PTANLLQTCA ALLMSPYCGM HSPNIEVVLV KIGLQSTRIG LKLIDILLRN CAASGSDPTD3480
 3481 LNSPLLFGRL NGLSSDSTID ILYQLGTTQD PGTKDRIQAL LKWVSDSAKM AALKRSGRMN3540
 3541 YMCPSSSAVE YGLLMPSPSH LHCVAAILWH SYELLVEYDL PALLDRELFE LLFNWSMSLP3600
 3601 CNVVLKKAVD SLLCSMCHIH PNYFSLLMGW MGIIPPPVQC HHRLSMTDDS KKQDLSSSLT3660
 3661 DDSKNAQAPL ALTESHLATL ASSSQSPEAI KQLLDSGLPS LLVRSLASFC FSHISYSESI3720
 3721 AQSIDNSQDK LRRHHVPQHC NKMPITADLV APILRFLTEV GNSHIMKDWL GGSEVNPLWT3780
 3781 ALLFLLCHSG STAGGHNLGA QQSSTRSASH SSAATTVLTT QQRTAIENAT VAFFLQCISC3840
 3841 HPNNQKLMAQ VLCELFQTAP QRGSLPTSGN ISGFVRRLFL QLMLEDEKVT MFLQSPCPLY3900
 3901 KGRINATSHV IQHPMFGAGH KFRTLHLPVS TTLSDVLDRV SDTPSITAKL ISEQKDDKEK3960
 3961 KNHEEKEKVK ADNGFQDNYS VVVASGLKSQ SKRAVSSTPP RPPSRRGRAI PDKIGSTSSS4020
 4021 ADTANKIITV PVFHLFHRLL AGQPLPAEMT LAQLLTLLYD RKLPQGYRSI DLTVKLGSKV4080
 4081 ITDPSLSKTD SFKRLHPEKD HGELIGSCPE DEALTPSDEC MDGVLDESLL ETCPIQSPLQ4140
 4141 VFAGMGGLAL IAERLPMLYP EVIQQVSAPV VASTTQEKPK DSDQFEWVTI EQSGELVYEA4200
 4201 PETIAAEPPP VKSAVQATSP IPAHSLAAFG LFLRLPGYAE VLLKERKHAQ CLLRLVLGVT4260
 4261 DDGEGSHILQ SPSANVLPTL PFHVLRSLFS ATPLTTDDGV LLRRMALEIG ALHLILVCLS4320
 4321 ALSHHAPRVP NSSLNQTEPQ VSNSHNPTST EEQQLYWAKG TGFGTGSTAS GWDVEQALTK4380
 4381 QRLEEEHVTC LLQVLASYIN PMSSAVNGEA QVSPESRAQN SSALPSVLLE LLSQSCLIPA4440
 4441 MSSYLRNDSV LDMARHVPLY RALLELLRAI ASCTSMVPLL LPLSTENGEE EEEEQSECQT4500
 4501 SVGTLLAKMK TCVDTYTNRL RSKRENIKTG VKPDAPDQEP EGLTLLVPDI QRTAEIVHAA4560
 4561 TTNLRQANQE KKLGEYSKKV AMKPKPLSVL KSLEEKYVAV MKTLQFDTFE MVSEDDDGKL4620
 4621 GFKVNYHYMS QVKNANDANS AARARRLAQE AVTLSTSLPL SSSSSVFVRC DEERLDIMKV4680
 4681 LITGPADTPY ANGCFEFDVY FPQDYPSSPP LVNLETTGGH SVRFNPNLYN DGKVCLSILN4740
 4741 TWHGRPEEKW NPQTSSFLQV LVSVQSLILV AEPYFNEPGY ERSRGTPSGT QSSREYDGNI4800
 4801 RQATVKWAML EQIRNPSPCF KEVIHKHFYL KRVEVMAQCE EWIADIQQYS SDKRVGRTMS4860
 4861 HHAAALKRHT AQLREELLKL PCPQGLDPDI EDASPVCRAT AGAEETLTHD HVKPSSSKDI4920
 4921 PSDFQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle