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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3056587, gi|2...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.27
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKRIVFFA YLPFFTIFMS FSFAGITKES PFSIGQTLSS SNGVYELGFF SLNNSQNQYL  60
   61 GIWFKSIIPQ VVVWVANREK PVTDSAANLG ISSNGSLLLS NGKHGVVWST GDIFASNGSR 120
  121 AELTDHGNLV FIDKVSGRTL WQSFEHLGNT LLPTSIMMYN LVAGEKRGLT AWKSYTDPSP 180
  181 GEFVALITPQ VPSQGIIMRG STRYYRTGPW AKTRFTGSPQ MDESYTSPFI LTQDVNGSGY 240
  241 FSFVERGKPS RMILTSEGTM KVLVHNGMDW ESTYEGPANS CDIYGVCGPF GLCVVSIPPK 300
  301 CKCFKGFVPK FAKEWKKGNW TSGCVRRTEL HCQGNSSGKD ANVFYTVPNI KPPDFYEYAN 360
  361 SQNAEECHQN CLHNCSCLAF SYIPGIGCLM WSKDLMDTRQ FSAAGELLSI RLARSELDVN 420
  421 KRKMTIVAST VSLTLFVIFG FAAFGFWRCR VEHNAHISND AWRNFLQSQD VPGLEFFEMN 480
  481 AIQTATNNFS LSNKLGPGGF GSVYKARNGK LQDGREIAVK RLSSSSGQGK QEFMNEIVLI 540
  541 SKLQHRNLVR VLGCCVEGTE KLLIYGFLKN KSLDTFVFDA RKKLELDWPK RFEIIEGIAR 600
  601 GLLYLHRDSR LRVIHRDLKV SNILLDEKMN PKISDFGLAR MFQGTQYQEK TRRVVGTLGY 660
  661 MSPEYAWTGV FSEKSDIYSF GVLLLEIISG KKISSFSYGE EGKALLAYIG LLCVQHEPAD 720
  721 RPNTLELLSM LTTTSDLPLP KKPTFVVHTR KDESPSNDSM ITVNEMTESV IQGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle