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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP27_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYSFLLIIL LLTISTSCCA APSSYVEEQL RDRISNLPGQ PSNVDFRQYS GYVTVHEERG  60
   61 RALFYWLVES PLARDPKSRP LVLWLNGGPG CSSVAYGAAE EIGPFRVGSD GKTLHSKLYA 120
  121 WNKLANLLFL ESPAGVGFSY SNTTSDLYTT GDQRTAEDSY IFLVNWFERF PQYKHREFYI 180
  181 VGESYAGHFV PQLSKLVHER NKGFKNPAIN LKGFMVGNAV TDDYHDYIGT FEYWWNHGLI 240
  241 SDSTYHQLKT ACYSVSSQHP SMQCMVALRN AELEQGNIDP YSIFTKPCNS TVALKRFLKG 300
  301 RYPWMSRAYD PCTERYSNVY FNRLDVQKAL HANVTRLSYP WKACSDIVGS YWDDSPLSML 360
  361 PIYKELITAG LKIWVFSGDT DAVVPITATR YSVDALKLAT ITNWYPWYDH GKVGGWSQVY 420
  421 KGLTLVTVAG AGHEVPLHRP RQAFILFRSF LESKPMPMT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle