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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149052462, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPPAGAARC LLCPALLLLL LLPPPPLLLL PPPPASARLV AATETPGGPP GYGAERILAV  60
   61 PVRTDAQGRL VSHVVSLETA RAGVRARRAA PVQTSGLPGG AEQDPGGRLF YNLTVFGRDL 120
  121 HLRLRPNARL VAPGATVEWQ GETGDTRVEP LLGTCLYVGD VADLPKTSSV ALSNCDGLAG 180
  181 LIRMEEEEFF IEPLEKGQTD QEAEQGRVHV VYRRPPTPKP PPVGGPQALD TGASQGNLDS 240
  241 LSRALGVLEE RINSSRRRVR RHATDDDYNI EVLLGVDDSV VQFHGKEHVQ KYLLTLMNIV 300
  301 NEIYHDESLG AHINVVLVRI ILLSHAKSMS LIEIGNPSQS LENVCRWAYL QQKPDTDHDE 360
  361 YHDHAIFLTR QDFGPSGMQG YAPVTGMCHP VRSCTLNHED GFSSAFVVAH ETGHVLGMEH 420
  421 DGQGNRCGDE VRLGSIMAPL VQAAFHRFHW SRCSQQELSR YLHSYDCLRD DPFAHDWPAL 480
  481 PQLPGLHYSM NEQCRFDFGL GYMMCTAFRT FDPCKQLWCS HPDNPYFCKT KKGPPLDGTM 540
  541 CAPGKHCFKG HCIWLTPDIL KRDGNWGAWT PFGSCSRTCG TGVKFRTRQC DSPHPANGGR 600
  601 TCSGLAYDFQ LCNPQDCPNS LADFREEQCR QWDLYFEHGD AQHHWLPHEH RDAKERCHLY 660
  661 CESKETGEVV SMKRMVHDGT RCSYKDAFSL CVRGDCRKVG CDGVIGSRKQ EDKCGVCGGD 720
  721 NTHCKVVKGT FTRSPRKQDY IKMFEIPAGA RHLLIQETDT TSHHLSVKNL ETGKFILNEE 780
  781 NHLDPNSRSF IAMGVEWEYR NEDERETLQT IGPLHGTITV LVIPEGDARI SLTYKYMIHE 840
  841 DSLNVDDNNV LEDDSVRHEW ALKKWSPCSK PCGGGSQFTK YGCRRRLDSK MVHRAFCSAL 900
  901 AKPKAIRRAC NPQECSQPVW VTGEWEPCTQ SCGRTGMQVR SVRCIQPLHN NTTRSVHTKH 960
  961 CNDHRPESRR ACNRELCPGR WRAGSWSQPG NSSDPSKKSY VVQWLSRPDP DSPIQKISSK1020
 1021 DQCQGDKSMF CRMEVLSRYC SIPSYNKLCC KSCSPNLGHA EDRGSEPPPG KHNDIDVFMP1080
 1081 TLPGPTVATQ VQPSPGPPLE APLNVSIANA TEDHPETNAV DVPYKIHGVD EEAQSPNLIP1140
 1141 RRPSPYVKTR NQRIQELINA AQRKEKPGKF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle