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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FB96_ARATH
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCTGSNAST IIQEQKHQQD SASADHRSTL LGLETELKKD SRSLLFSCCC LALAWAAALP  60
   61 RASAAARSAL TLASAFTLSL ASTAAFSVFS LASAYAPALL CFCETFGSLK GYEVENHMNA 120
  121 SVTMLEEAIM YSSFSSKKRI RHSSSLTNDL IEEILSRLHS KSVARFRCVS KQCASMFASP 180
  181 YFKKLFQTRS SAKPSLLFAI ADYGIEEDYS MKFFSSPQLE NTYEKTSSTL VAAAEFHVKF 240
  241 SPDKSIPIYL SEDPRYVSIG YASGLIYNYC GRYVGRPLIC NPNTGRYAIL PYRYTYRKAY 300
  301 SFFGFDPIDK QYKALSLPYV DGPGRSKVLT FGAGDLTWRN IKSHTEDISY RYYEYVIVCF 360
  361 DVTSEKFTFV GVQKFCLLIN YKGKLDVIYW EDDVDIHEIC YFAKDLDEYL DENLDADATN 420
  421 ELHVWVLEDV EKQEWSKYAY TWTDDTFFHR HLSIAGATAS GEIVFSMRKY TSKQPFYVFY 480
  481 FNPERNTLQR VEIQGFGEAF RTTCSVRTFV NHIEDLDVND LEQLNYIGTR R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle