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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25407963, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEEHCIVSQ NHSISMSLAT TMIVLFLQII TCFLFTTTVS SPHGFTIDLI QRRSNSSSFR  60
   61 LSKNQLQGAS PYADTLFDYN IYLMKLQVGT PPFEIAAEID TGSDLIWTQC MPCPDCYSQF 120
  121 DPIFDPSKSS TFNEQRCHGK SCHYEIIYED NTYSKGILAT ETVTIHSTSG EPFVMAETTI 180
  181 GCGLHNTDLD NSGFASSSSG IVGLNMGPRS LISQMDLPYP GLISYCFSGQ GTSKINFGTN 240
  241 AIVAGDGTVA ADMFIKKDNP FYYLNLDAVS VEDNRIETLG TPFHAEDGNI VIDSGSTVTY 300
  301 FPVSYCNLVR KAVEQVVTAV RVPDPSGNDM LCYFSETIDI FPVITMHFSG GADLVLDKYN 360
  361 MYMESNSGGL FCLAIICNSP TQEAIFGNRA QNNFLVGYDS SSLLLQGASP YADTLYDYSI 420
  421 YLMKLQVGTP PFEIVAEIDT GSDIIWTQCM PCPNCYSQFA PIFDPSKSST FREQRCNGNS 480
  481 CHYEIIYADK TYSKGILATE TVTIPSTSGE PFVMAETKIG CGLDNTNLQY SGFASSSSGI 540
  541 VGLNMGPLSL ISQMDLPYPG LISYCFSGQG TSKINFGTNA IVAGDGTVAA DMFIKKDNPF 600
  601 YYLNLDAVSV EDNLIATLGT PFHAEDGNIF IDSGTTLTYF PMSYCNLVRE AVEQVVTAVK 660
  661 VPDMGSDNLL CYYSDTIDIF PVITMHFSGG ADLVLDKYNM YLETITGGIF CLAIGCNDPS 720
  721 MPAVFGNRAQ NNFLVGYDPS SNVISFSPTN CSALWS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle