YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157823505, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALLLLLPL LLLLPLLLKL DLWPQLRWLR ADLAFTVRAL RCKRALRARA LAAAAADPES  60
   61 PEGGCSLAWR LAHLAREQPT RTFLIYGARC FSYAEAESES NRIARAFLRA RGWTAGGRGS 120
  121 GRGSTEEDAR VAPAAGDPAA GGTTAPPLAP GATVALLLPA GPEFLWLWFG LAKAGLRTAF 180
  181 VPSALRRGPL LHCLRSCGAS AVVLATEFLE SLEPDLPALR AMGLHLWATG PGTNLAGISN 240
  241 LLSEAATQVD EPVPGYLSAP QNIMDTCLYI FTSGTTGLPK AARVSHLKVL QCQGFYQLCG 300
  301 VHQEDVIYLA LPLYHMSGSL LGIVGCLGIG ATVVLKPKFS ASQFWEDCQR HGVTVFQYIG 360
  361 ELCRYLVNQP PSKAECGHKV RLAVGSGLRP DTWDRFVRRF GPLQILETYG ATEGNVATFN 420
  421 YTGQQGAVGR ASWLYKHIFP FSLIRYDVMT GEPIRNAQGH CMAASPGEPG LLVAPVSQES 480
  481 PFLGYAGAPE LAQEKLLKDV FRPGDIFFNT GDLLVCDEQG FLHFHDRTGD TFRWKGENVA 540
  541 TTEVAEVLEA LDFLQEVNIY GVTVPGHEGR AGMAALALRP PQALDLVQLY THVSENLPPY 600
  601 ARPRFLRLQE SLATTETFKQ QKVRMANEGF DPSALSDPLY VLDQDKGAYL PLTPARYNAL 660
  661 LSGDLRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle