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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149044571, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPKSGVAE SAGLACSRAA AGGNRMKDSE NKGASSPDME PSYGGGLFDM VKGGAGRLFS  60
   61 NLKDNLKDTL KDTSSRVIQS VSSYTKGDLD FTYVTSRIIV MSFPMDSVDI GFRNQVDDIR 120
  121 SFLDSRHLDH YTVYNLSPKS YRTAKFHSRV SECSWPIRQA PSLHNLFAVC RNMYNWLLQN 180
  181 PKNVCVVHCL DGRAASSILV GAMFIFCNLY STPGPAVRLL YAKRPGIGLS PSHRRYLGYM 240
  241 CDLLADKPYR PHFKPLTIKA ITVSPIPFFN KQRNGCRPYC DVLIGETKIF STCTDFERMK 300
  301 EYRVQDGKIF IPLNITVQGD VIVSMYHLRS TIGSRLQAKV TNTQIFQLQF HSGFIPLDTT 360
  361 VLKFTKPELD ACDVPEKYPQ LFQVTLDIEV QPQDKVIDLT PPWEHYCTKD VNPSILFSSQ 420
  421 QEHQDTLALG DQKSEKSRCE EDHAALVNQE SEQSDDELLT LSSPHGNADG DKPHGAKKPG 480
  481 KKQQEPAAPP PPEEVDLLGL EGSDVSTNFS PLAAPPSNSE LLSDLFGGGG ATGPAQAGQV 540
  541 GVEDVFHPSG PASAQSTPRR ATTSASASPT LRVGEGATFD PFGAPAKPPG QDLLGSFLNT 600
  601 SNASSDPFLQ PTRSPSPTVH ASSTPAVNIQ PDIAGGWDWH AKPGGFGMGS KSAATSPTGS 660
  661 THGTPTHQSK PQTLDPFADL GTLGSSSFAS KPTTPTGLGG GFPPLSSPQK ASPQPMGGGW 720
  721 QQPAGYNWQQ AQPKPQSSMP HSSPQNRPNY NVSFSAMPAG QSDRGKGSTN LEGKQKAADF 780
  781 EDLLSSQGFN AHKDKKGPRT IAEMRKEEMA KEMDPEKLKI LEWIEGKERN IRALLSTMHT 840
  841 VLWAGETKWK PVGMADLVTP EQVKKVYRRA VLVVHPDKAT GQPYEQYAKM IFMELNDAWS 900
  901 EFENQGQKPL Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle