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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15241478, gi|...
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSKPLPTI SCISVFALYF SFYTITLTSS TSLQDDFIKC LYRNTNVRFT LDKTFFTPER  60
   61 NASIFTEVLE STAQNQRYLT KTMPKPGFIF KPVHESHVQA SVICSKKLEI HFRVRSGGHD 120
  121 YEGVSYVSQI EKPFVLIDLS KLRQINVDIK DTSAWVEAGA TVGELYYRIA EKSKFHGFPA 180
  181 GVYPSLGIGG HITGGAYGSL MRKYGLAADN VLDAKIVDAN GKLLDRASMG EDLFWAIRGG 240
  241 SGGSFGIILS WKIKLVPVPE TLTVFTVTKT FEQDRSFKIL SKWQEIADNL VDELFLRVFF 300
  301 TVSGNKANKT VTMAYIGQFL GEKGTLMEVM KKDFPELGLT QKDCIEMSWI DSIIYNSGFP 360
  361 TNPPPPIEIL LQAKSPIGKV YFKGKSDFAK KPIPVLGLEG MFKKLLEEDA ALVIWTPYGG 420
  421 KMDKIPESEI PFPHRNGTNF MIQYYRSWSD SEKRPNRRTK WIRELYGYMT PYVSSNPRQA 480
  481 YVNYRDLDLG QNKDNSKSNF IEAKIWGANY FKDNFNRLVR IKSKVDPDNF FRHEQSIPTL 540
  541 PV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle